How to do surface functional connectivity analysis?
Using Brain Voyager and MATLAB to do a computaionally efficient and intuitive surface analysis
Understanding Surface
Preprocessing in Brain Voyager
Surface reconstruction in freesurfer
Surface group normalization (CBA alignment in BV)
Move functional data to native surface (BV)
Move functional data to reference surface (BV)
Move volumetric ROI (VOI) to surface ROI (POI) (BV)
Calculate functional connectivity in MATLAB
Export functional connectivity map to surface statistical maps for visualization (BV)
Non-parametric testing for thresholding whole brain connectivity analysis
More Coming…